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1.
Anal Chim Acta ; 1137: 125-135, 2020 Nov 15.
Article in English | MEDLINE | ID: mdl-33153596

ABSTRACT

An environmentally friendly deep eutectic solvent (DES) composed of trifluoroacetamide and benzyltrimethylammonium chloride modified ß-cyclodextrin (CD) grafted magnetic beads (MB-NH2@CD@DES) were synthesized for the first time and applied to the solid-phase extraction of trypsin. Among the five trypsin extractants prepared in this work (MB, MB-NH2, MB-NH2@CD, MB-NH2@DES, MB-NH2@CD@DES), the extractant MB-NH2@CD@DES with higher extraction capacity for trypsin was selected as final extractant. The extraction capacity of MB-NH2@CD@DES for trypsin can reach up to 549.87 mg⋅g-1 under the optimized conditions. The Langmuir adsorption equilibrium was found fitted better with equilibrium relation between MB-NH2@CD@DES and trypsin than Freundlich adsorption equilibrium. And a superior extraction for trypsin was verified by comparing the extraction capacity of MB-NH2@CD@DES for trypsin and four other common proteins. Compared with some reported trypsin extractants, the MB-NH2@CD@DES had a shorter extraction process, higher extraction capacity, more convenient operation of separation, a safer and more environmentally friendly synthesis process. With the optimized eluent, a great elution rate (74.32%) of trypsin was achieved. The absolute recovery of trypsin in trypsin standard solution was calculated to be 16.8%. And the extraction capacity of MB-NH2@CD@DES toward trypsin still maintained well after ten times recycling and reuse. The detection limit (LOD) and quantitative limit (LOQ) were 0.072 mg⋅mL-1 and 0.240 mg⋅mL-1 respectively. By sodium dodecyl sulfate polyacrylamide gel electrophoresis experiment, the extraction ability of MB-NH2@CD@DES to trypsin from real sample was fully demonstrated. All above results showed the potential of fabricated MB-NH2@CD@DES as a superior extractant for trypsin from real complex samples.


Subject(s)
Magnetic Phenomena , Solvents , Trypsin/isolation & purification , beta-Cyclodextrins , Solid Phase Extraction
2.
Int J Mol Sci ; 21(7)2020 Mar 31.
Article in English | MEDLINE | ID: mdl-32244300

ABSTRACT

This work describes the chemical synthesis, combinatorial selection, and enzymatic evaluation of peptidomimetic fluorescent substrates specific for the trypsin-like (ß2) subunit of the 20S human proteasome. After deconvolution of a library comprising nearly 6000 compounds composed of peg substituted diaminopropionic acid DAPEG building blocks, the sequence ABZ-Dap(O2(Cbz))-Dap(GO1)-Dap(O2(Cbz))-Arg-ANB-NH2, where ABZ is 2-aminobenzoic acid, and ANB- 5 amino 2- nitro benzoic acid was selected. Its cleavage followed sigmoidal kinetics, characteristic for allosteric enzymes, with Km = 3.22 ± 0.02 µM, kcat = 245 s-1, and kcat/Km = 7.61 × 107 M-1 s-1. This process was practically halted when a selective inhibitor of the ß2 subunit of the 20S human proteasome was supplemented to the reaction system. Titration of the substrate resulting in decreased amounts of proteasome 20S produced a linear signal up to 10-11 M. Using this substrate, we detected human proteasome 20S in human urine samples taken from the bladders of cancer patients. This observation could be useful for the noninvasive diagnosis of this severe disease.


Subject(s)
Fluorescent Dyes/chemistry , Peptidomimetics/chemistry , Proteasome Endopeptidase Complex/metabolism , Trypsin/isolation & purification , Humans , Kinetics , Models, Molecular , Nuclear Receptor Co-Repressor 1 , Proteasome Endopeptidase Complex/chemistry , Substrate Specificity , Urinary Bladder Neoplasms/metabolism , ortho-Aminobenzoates/metabolism
3.
Int J Biol Macromol ; 147: 890-897, 2020 Mar 15.
Article in English | MEDLINE | ID: mdl-31739056

ABSTRACT

A novel streptomyces trypsin GM2938 was selected as the object of study. The active GM2938 contains 223 amino acid residues. Constructing recombinant plasmid and transforming Bacillus subtilis SCK6, the heterogenous expression of GM2938 was achieved. Through optimization of fermentation conditions, the expression level of GM2938 reached 1622.2 U/mL (esterase activity) and 33.8 U/mL (amidase activity). The recombinant trypsin was purified and measured: the specific activity of esterase was 5.6 × 103 U/mg, and the specific activity of amidase was 1.1 × 103 U/mg. Furthermore, the enzymatic properties of GM2938 were explore: the optimal reaction temperature and pH were 50 °C and 9.0, respectively; the recombinant enzyme show high stability at 25 °C and range of pH 5.0-9.0; Ca2+, K+, Mg2+, EDTA, DTT, DMSO, methanol, glycerin and ethanediol could promote the esterase and amidase activities at the investigated concentrations, while Fe2+, SDS, tritonx-100, acetone, chloroform and n-hexane inhibited the trypsin activities. Kinetic parameters of GM2938 were calculated: the Km of BAEE was 3.15 × 10-5 mol·L-1, Vmax value was 2.87 × 10-4 mol·L-1·min-1; the Km of BAPAN was 2.20 × 10-4 mol·L-1, the Vmax was 2.40 × 10-4 mol·L-1·min-1. These properties give trypsin GM2938 a potential application prospect.


Subject(s)
Bacillus subtilis , Bacterial Proteins , Cloning, Molecular , Streptomyces , Trypsin , Bacillus subtilis/enzymology , Bacillus subtilis/genetics , Bacterial Proteins/biosynthesis , Bacterial Proteins/chemistry , Bacterial Proteins/genetics , Bacterial Proteins/isolation & purification , Recombinant Proteins/biosynthesis , Recombinant Proteins/chemistry , Recombinant Proteins/genetics , Recombinant Proteins/isolation & purification , Streptomyces/enzymology , Streptomyces/genetics , Trypsin/biosynthesis , Trypsin/chemistry , Trypsin/genetics , Trypsin/isolation & purification
4.
ACS Appl Mater Interfaces ; 11(50): 47428-47436, 2019 Dec 18.
Article in English | MEDLINE | ID: mdl-31747245

ABSTRACT

The detection of proteases and their complexes with inhibitor proteins is of great importance for diagnosis and medical-treatment applications. In this study, we report a fingerprint-based sensor using an array of single-stranded DNAs (ssDNAs) labeled with environment-responsive 3'-carboxytetramethylrhodamine (TAMRA) for the identification of proteases. Four TAMRA-modified ssDNAs with different sequences solubilized in two different buffer solutions were incorporated in an array that was capable of generating fluorescent fingerprints unique to the proteases through diverse cross-reactive interactions, allowing the discrimination of (i) 8 proteases and (ii) 12 different mixtures of trypsin and its inhibitor protein (α1-antitrypsin) by multivariate analysis. Constructing an array with TAMRA-modified DNA aptamers that bind to different sites of human thrombin provides fluorescence fingerprints that reflect a reduction of the exposed surface area of thrombin upon complexation with antithrombin III, even in the presence of human serum. We finally demonstrate the potential of hybridization with complementary DNAs as an effective means to easily double the fingerprint information for proteases. Our approach based on the cross-reactive capability of ssDNAs enables high-throughput fingerprint-based sensing that can be flexibly designed and easily constructed, not only for the identification of a variety of proteins including proteases but also for the evaluation of their complexation ability.


Subject(s)
Biosensing Techniques , Multiprotein Complexes/isolation & purification , Peptide Hydrolases/isolation & purification , Thrombin/chemistry , Antithrombin III/chemistry , Aptamers, Nucleotide/chemistry , DNA, Single-Stranded/chemistry , Fluorescent Dyes/chemistry , Humans , Multiprotein Complexes/chemistry , Peptide Hydrolases/chemistry , Protein Binding , Rhodamines/chemistry , Trypsin/chemistry , Trypsin/isolation & purification , alpha 1-Antitrypsin/chemistry , alpha 1-Antitrypsin/isolation & purification
5.
PLoS One ; 14(6): e0218374, 2019.
Article in English | MEDLINE | ID: mdl-31246970

ABSTRACT

Trypsin is by far the most commonly used protease in proteomics. Even though the amount of protease used in each experiment is very small, digestion of large amounts of protein prior to enrichment can be rather costly. The price of commercial trypsin is highly dependent on the quality of the enzyme, which is determined by its purity, activity, and chemical modifications. In this study we evaluated several strategies for improving the quality of crude trypsin by reductive methylation and affinity purification. We present a protocol applicable to most proteomics laboratories for obtaining a highly stable and pure trypsin preparation using reductive methylation and purification by benzamidine-sepharose. The entire workflow can be performed within a day and yields ~4 mg per batch but is completely scalable. The methylated product was benchmarked against sequencing grade trypsin from Promega and they were found to be comparable for one hour digestions at elevated temperatures, where residual chymotryptic activity was found to be negligible.


Subject(s)
Proteomics , Trypsin/chemistry , Chromatography, Liquid , Enzyme Stability , HeLa Cells , Hot Temperature , Humans , Peptides/chemistry , Proteolysis , Proteomics/economics , Proteomics/methods , Tandem Mass Spectrometry , Trypsin/isolation & purification , Trypsin/metabolism , Workflow
6.
J Sep Sci ; 42(17): 2788-2795, 2019 Sep.
Article in English | MEDLINE | ID: mdl-31218807

ABSTRACT

With the explosive growth of the bioscience and biopharmaceuticals, the demand for high efficient analysis and separation of proteins is urgent. High-performance liquid chromatography is an appropriate technology for this purpose, and the stationary phase is the kernel to the separation efficiency. In this study, flow-through poly(styrene-co-divinylbenzene) microspheres characteristic of the binary pores, i.e. flow-through pores and mesopores, were synthesized; this special porous structure would benefit the convective mass transfer while guarantee the high specific surface area. Owing to the hydrophobic nature, poly(styrene-co-divinylbenzene) microspheres were suitable as the reversed-phase stationary phase for separation of proteins. For the high permeability of the poly(styrene-co-divinylbenzene) microspheres packed column, fast separation of the studied six proteins in ∼2 min was achieved. The recoveries of studied proteins were acceptable in the range of 79.0-99.4%. The proposed column had good pH stability of 1-13 and repeatability. Moreover, the column was applied for egg white fast separation, further demonstrating its applicability for complex bio-sample separation. The flow-through poly(styrene-co-divinylbenzene) microspheres were promising for fast separation of large molecules.


Subject(s)
Chromatography, Reverse-Phase , Microspheres , Polystyrenes/chemistry , Animals , Cattle , Cytochromes c/chemistry , Cytochromes c/isolation & purification , Lactoglobulins/chemistry , Lactoglobulins/isolation & purification , Muramidase/chemistry , Muramidase/isolation & purification , Muramidase/metabolism , Ribonuclease, Pancreatic/chemistry , Ribonuclease, Pancreatic/isolation & purification , Ribonuclease, Pancreatic/metabolism , Serum Albumin, Bovine/chemistry , Serum Albumin, Bovine/isolation & purification , Swine , Transferrin/chemistry , Transferrin/isolation & purification , Trypsin/chemistry , Trypsin/isolation & purification , Trypsin/metabolism
7.
Protein Pept Lett ; 26(3): 170-175, 2019.
Article in English | MEDLINE | ID: mdl-30338728

ABSTRACT

BACKGROUND: Trypsin from fish species is considered as a cold-adapted enzyme that may find potential biotechnological applications. In this work, the recombinant expression, refolding and activation of Trypsin I (TryI) from Monterey sardine (Sardinops sagax caerulea) are reported. METHODS: TryI was overexpressed in Escherichia coli BL21 as a fusion protein of trypsinogen with thioredoxin. Refolding of trypsinogen I was achieved by dialysis of bacterial inclusion bodies with a recovery of 16.32 mg per liter of Luria broth medium. RESULTS: Before activation, the trypsinogen fusion protein did not show trypsin activity. Trypsinogen I was activated by adding 0.002 U of native TryI purified from the sardine pyloric caeca (nonrecombinant). The activated recombinant trypsin showed three times more activity than the nonrecombinant trypsin alone. CONCLUSION: The described protocol allowed obtaining sufficient amounts of recombinant TryI from Monterey sardine fish for further biochemical and biophysical characterization of its coldadaptation parameters.


Subject(s)
Escherichia coli , Fish Proteins , Fishes/genetics , Inclusion Bodies , Protein Refolding , Trypsin , Animals , Escherichia coli/genetics , Escherichia coli/metabolism , Fish Proteins/biosynthesis , Fish Proteins/chemistry , Fish Proteins/genetics , Fish Proteins/isolation & purification , Inclusion Bodies/chemistry , Inclusion Bodies/genetics , Inclusion Bodies/metabolism , Recombinant Proteins/biosynthesis , Recombinant Proteins/chemistry , Recombinant Proteins/genetics , Recombinant Proteins/isolation & purification , Trypsin/biosynthesis , Trypsin/chemistry , Trypsin/genetics , Trypsin/isolation & purification
8.
Arch Razi Inst ; 74(4): 405-411, 2019 12.
Article in English | MEDLINE | ID: mdl-31939257

ABSTRACT

The development of the marine aquaculture industry has led to the generation of significant amounts of fish wastes. Marine farm wastes exert adverse effects on the surrounding area of the cages. On the other hand, wastes of fish and other aquatic animals are regarded as major sources of valuable natural bioactive compounds, including enzymes, proteins, bioactive peptides, oil, amino acids, collagen, gelatin, calcium, biopolymers, and water-soluble minerals. To investigate the potential of marine fish waste, the whole digestive system of yellowfin seabream (Acanthopagrus latus) was extracted for extraction and identification of trypsin enzyme. Fish (179.93±93.67 g; 184±28.17 cm) were caught from the Persian Gulf and stored at -20 °C. Yellowfin seabream were dissected and their whole digestive systems were removed. Samples were thoroughly washed with distilled water and purified through defatting using acetone and ammonium sulfate precipitation. The following issues were assessed: the total and specific activity of trypsin, protein determination, molecular weight, enzyme activity and stability in different pH values and temperatures. The obtained results indicated that specific activity and protein content of trypsin enzyme were 4.4 U and 3.4 mg/ml, respectively. The molecular weight of 23 kDa was reported for trypsin using sodium dodecyl sulfate polyacrylamide gel electrophoresis (SDS-PAGE) method. Maximum activity and stability of trypsin were observed at 60°C and 45°C, respectively. Trypsin demonstrated maximum activity and stability at a pH value of 8.0. In general, the results of the current study suggested that trypsin extracted from the digestive system of yellowfin seabream has considerable potential for industrial applications, such as the food industry, owing to its characteristics and stability under alkaline conditions.


Subject(s)
Digestive System/enzymology , Sea Bream/physiology , Trypsin/isolation & purification , Animals , Indian Ocean
9.
Int J Biol Macromol ; 107(Pt B): 1864-1870, 2018 Feb.
Article in English | MEDLINE | ID: mdl-29032086

ABSTRACT

Two trypsins (A and B) from the liver of albacore tuna (Thunnus alalunga) were purified to homogeneity using a series of column chromatographies including Sephacryl S-200, Sephadex G-50 and Diethylaminoethyl-cellulose. Purity was increased to 80.35- and 101.23-fold with approximately 3.1 and 19.2% yield for trypsins A and B, respectively. The molecular weights of trypsins A and B were estimated to be 21 and 24kDa, respectively, by SDS-PAGE and size exclusion chromatography. Both trypsins showed only one band on native-PAGE. Trypsins A and B exhibited the maximal activity at 60°C and 55°C, respectively, and had the same optimal pH at 8.5 using Nα-p-Tosyl-l-arginine methyl ester hydrochloride (TAME) as a substrate. Stabilities of both trypsins were well maintained at a temperature up to 50°C and in the pH range of 7.0-11.0 and were highly dependent on the presence of calcium ion. The inhibition test demonstrated strong inhibition by soybean trypsin inhibitor and TLCK. Activity of both trypsins continuously decreased with increasing NaCl concentration (0-30%). The N-terminal amino acid sequence of 20 residues of the two trypsin isoforms had homology when compared to those of other fish trypsins.


Subject(s)
Liver/enzymology , Trypsin/isolation & purification , Tuna/metabolism , Amino Acid Sequence , Animals , Calcium/pharmacology , Edetic Acid/pharmacology , Enzyme Stability/drug effects , Hydrogen-Ion Concentration , Ions , Isoenzymes/isolation & purification , Kinetics , Sodium Chloride/pharmacology , Temperature , Trypsin/chemistry , Trypsin Inhibitors/pharmacology
10.
Article in English | MEDLINE | ID: mdl-28762531

ABSTRACT

Purification of active trypsin in the digestive process of insects is essential for the development of potent protease inhibitors (PIs) as an emerging pest control technology and research into insect adaptations to dietary PIs. An important aspect is the presence of proteolytic microorganisms, which contribute to host nutrition. Here, we purified trypsins produced by bacteria Bacillus cereus, Enterococcus mundtii, Enterococcus gallinarum, and Staphylococcus xylosus isolated from the midgut of Anticarsia gemmatalis. The trypsins had a molecular mass of approximately 25 kDa. The enzymes showed increased activity at 40°C, and they were active at pH values 7.5-10. Aprotinin, bis-benzamidine, and soybean Kunitz inhibitor (SKTI) significantly inhibited trypsin activity. The l-1-tosyl-amido-2-phenylethylchloromethyl ketone (TPCK), pepstatin A, E-64, ethylenediamine tetraacetic acid, and calcium ions did not affect the enzyme activity at the concentrations tested. We infer the purified trypsins do not require calcium ions, by which they differ from the trypsins of other microorganisms and the soluble and insoluble trypsins characterized from A. gemmatalis. These data suggest the existence of different isoforms of trypsin in the velvetbean caterpillar midguts.


Subject(s)
Bacterial Proteins/isolation & purification , Moths/enzymology , Trypsin/isolation & purification , Animals , Bacterial Proteins/metabolism , Gastrointestinal Tract/microbiology , Kinetics , Moths/microbiology , Trypsin/metabolism , Trypsin Inhibitors
11.
Talanta ; 174: 139-147, 2017 Nov 01.
Article in English | MEDLINE | ID: mdl-28738559

ABSTRACT

A novel magnetic extractant, PEG 4000 modified Fe3O4nanomaterial that coated with dianionic amino acid ionic liquid (Fe3O4@PEG@DAAAIL), was successfully synthesized and characterized. X-ray diffraction (XRD), transmission electron microscope (TEM), vibrating sample magnetometer (VSM), fourier transform infrared spectrometry (FT-IR), thermal gravimetric analysis (TGA) and zeta potentials were used to confirm that the novel nanocomposite was successfully synthesized. Subsequently, the prepared Fe3O4@PEG@DAAAIL nanocomposite was used as the extractant for trypsin coupled with magnetic solid-phase extraction (MSPE). The concentrations of trypsin in the supernatant were detected by UV-vis spectrophotometer at 278nm. The extraction ability turned out to be better than the other four kinds of extractants prepared in this work. Furthermore, the influence of a series of factors, such as extraction time and temperature, initial trypsin concentration, the value of pH and ionic strength, was systematically investigated. Under the optimal extraction condition, the extraction capacity for trypsin could reach up to 718.73mg/g, absolutely higher than that of other adsorbents reported. This satisfactory extraction capacity could be maintained unchangeable after at least eight days, and kept over 90% of initial extraction capacity after eight recycles. What's more, the activity of trypsin after extraction retained 92.29% of initial activity, verifying the biocompatibility of the prepared extractant. Finally, the developed Fe3O4@PEG@DAAAIL-MSPE method was successfully applied to the real sample analysis with satisfactory results. All of above proves the potential value of Fe3O4@PEG@DAAAIL-MSPE in the analysis of biomass.


Subject(s)
Amino Acids/chemistry , Ionic Liquids/chemistry , Magnetite Nanoparticles/chemistry , Nanocomposites/chemistry , Polyethylene Glycols/chemistry , Solid Phase Extraction/methods , Trypsin/isolation & purification , Hydrogen-Ion Concentration , Osmolar Concentration , Temperature , Time Factors
12.
Food Chem ; 226: 75-78, 2017 Jul 01.
Article in English | MEDLINE | ID: mdl-28254021

ABSTRACT

This work presents an inexpensive, simple and fast procedure to purify trypsin based on affinity binding with ferromagnetic particles of azocasein composite (mAzo). Crude extract was obtained from intestines of fish Nile tilapia (Oreochromis niloticus) homogenized in buffer (01g tissue/ml). This extract was exposed to 100mg of mAzo and washed to remove unbound proteins by magnetic field. Trypsin was leached off under high ionic strength (3M NaCl). Preparation was achieved containing specific activity about 60 times higher than that of the crude extract. SDS-PAGE showed that the purified protein had molecular weight (24kDa) in concordance with the literature for the Nile tilapia trypsin. The mAzo composite can be reused and applied to purify trypsin from other sources.


Subject(s)
Caseins/chemistry , Cichlids/metabolism , Intestines/enzymology , Trypsin/isolation & purification , Animals , Chemical Fractionation , Fish Proteins/chemistry , Fish Proteins/isolation & purification , Iron/chemistry , Magnetite Nanoparticles/chemistry , Molecular Weight , Trypsin/chemistry
13.
J Biomol Struct Dyn ; 35(10): 2257-2268, 2017 Aug.
Article in English | MEDLINE | ID: mdl-27434220

ABSTRACT

The conjugation of trypsin (try) and trypsin inhibitor (tryi) with poly(ethylene glycol) (PEG) and methoxypoly(ethylene glycol) anthracene (mPEG-anthracene) was investigated in aqueous solution, using multiple spectroscopic methods, thermodynamic analysis, and molecular modeling. Thermodynamic parameters ΔS, ΔH, and ΔG showed protein-PEG bindings occur via H-bonding and van der Waals contacts with trypsin inhibitor forming more stable conjugate than trypsin. As polymer size increased more stable PEG-protein conjugate formed, while hydrophobic mPEG-anthracene forms less stable protein complexes. Modeling showed the presence of several H-bonding contacts between polymer and amino acids that stabilize protein-polymer conjugation. Polymer complexation induces more perturbations of trypsin inhibitor structure than trypsin with reduction of protein alpha-helix and major increase in random structures, indicating protein structural destabilization.


Subject(s)
Anthracenes/chemistry , Polyethylene Glycols/chemistry , Trypsin Inhibitors/chemistry , Trypsin/chemistry , Water/chemistry , Animals , Binding Sites , Cattle , Hydrogen Bonding , Hydrophobic and Hydrophilic Interactions , Kinetics , Pancreas/chemistry , Protein Binding , Protein Conformation, alpha-Helical , Protein Conformation, beta-Strand , Protein Interaction Domains and Motifs , Solutions , Glycine max/chemistry , Thermodynamics , Trypsin/isolation & purification , Trypsin Inhibitors/isolation & purification
14.
Biochim Biophys Acta Proteins Proteom ; 1865(1): 11-19, 2017 Jan.
Article in English | MEDLINE | ID: mdl-27742554

ABSTRACT

Trypsins from Atlantic cod (Gadus morhua), consisting of several isoenzymes, are highly active cold-adapted serine proteases. These trypsins are isolated for biomedical use in an eco-friendly manner from underutilized seafood by-products. Our group has explored the biochemical properties of trypsins and their high potential in biomedicine. For broader utilization of cod trypsins, further characterization of biochemical properties of the individual cod trypsin isoenzymes is of importance. For that purpose, a benzamidine purified trypsin isolate from Atlantic cod was analyzed. Anion exchange chromatography revealed eight peaks containing proteins around 24kDa with tryptic activity. Based on mass spectrometric analysis, one isoenzyme gave the best match to cod trypsin I and six isoenzymes gave the best match to cod trypsin X. Amino terminal sequencing of two of these six trypsin isoenzymes showed identity to cod trypsin X. Three sequence variants of trypsin X were identified by cDNA analysis demonstrating that various forms of this enzyme exist. One trypsin X isoenzyme was selected for further characterization based on abundance and stability. Stepwise increase in catalytic efficiency (kcat/Km) of this trypsin X isoenzyme was obtained with substrates containing one to three amino acid residues. The study demonstrates that the catalytic efficiency of this trypsin X isoenzyme is comparable to that of cod trypsin I, the most abundant and highly active isoenzyme in the benzamidine cod trypsin isolate. Differences in pH stability and sensitivity to inhibitors of the trypsin X isoenzyme compared to cod trypsin I were detected that may be important for practical use.


Subject(s)
Isoenzymes/isolation & purification , Trypsin/isolation & purification , Amino Acid Sequence , Animals , Chromatography, High Pressure Liquid , Chromatography, Ion Exchange , Cloning, Molecular , Gadus morhua , Isoenzymes/chemistry , Isoenzymes/genetics , Isoenzymes/metabolism , Sequence Homology, Amino Acid , Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization , Trypsin/chemistry , Trypsin/genetics , Trypsin/metabolism
15.
Anal Chim Acta ; 946: 64-72, 2016 Nov 23.
Article in English | MEDLINE | ID: mdl-27823670

ABSTRACT

Novel poly(deep eutectic solvent) grafted silica-coated magnetic microspheres (Fe3O4@SiO2-MPS@PDES) were prepared by polymerization of choline chloride-itaconic acid (ChCl-IA) and γ-MPS-modified magnetic silica composites, and were characterized by vibrating sample magnetometer (VSM), Fourier transform infrared spectrometry (FT-IR), X-ray photoelectron spectra (XPS), thermal gravimetric analysis (TGA) and transmission electron microscope (TEM). Then the synthetic Fe3O4@SiO2-MPS@PDES microspheres were applied for the magnetic solid-phase extraction (MSPE) of trypsin for the first time. After extraction, the concentration of trypsin in the supernatant was determined by a UV-vis spectrophotometer. Single factor experiments were carried out to investigate the effects of the extraction process, including the concentration of trypsin, the ionic strength, the pH value, the extraction time and the temperature. Experimental results showed the extraction capacity could reach up to 287.5 mg/g under optimized conditions. In comparison with Fe3O4@SiO2-MPS, Fe3O4@SiO2-MPS@PDES displayed higher extraction capacity and selectivity for trypsin. According to the regeneration studies, Fe3O4@SiO2-MPS@PDES microspheres can be recycled six times without significant loss of its extraction capacity, and retained a high extraction capacity of 233 mg/g after eight cycles. Besides, the activity studies also demonstrated that the activity of the extracted trypsin was well retained. Furthermore, the analysis of real sample revealed that the prepared magnetic microspheres can be used to purify trypsin in crude bovine pancreas extract. These results highlight the potential of the proposed Fe3O4@SiO2-MPS@PDES-MSPE method in separation of biomolecules.


Subject(s)
Magnets/chemistry , Silicon Dioxide/chemistry , Solid Phase Extraction/methods , Solvents/chemistry , Trypsin/isolation & purification , Animals , Cattle , Osmolar Concentration , Temperature , Time Factors , Trypsin/chemistry , Trypsin/metabolism
16.
Nat Protoc ; 11(3): 443-55, 2016 Mar.
Article in English | MEDLINE | ID: mdl-26866789

ABSTRACT

Molecularly imprinted polymers (MIPs) are synthetic materials, generally based on acrylic or methacrylic monomers, that are polymerized in the presence of a specific target molecule called the 'template' and capable of rebinding selectively to this target molecule. They have the potential to be low-cost and robust alternatives to biomolecules such as antibodies and receptors. When prepared by traditional synthetic methods (i.e., with free template in solution), their usefulness has been limited by high binding site heterogeneity, the presence of residual template and the fact that the production methods are complex and difficult to standardize. To overcome some of these limitations, we developed a method for the synthesis of MIP nanoparticles (nanoMIPs) using an innovative solid-phase approach, which relies on the covalent immobilization of the template molecules onto the surface of a solid support (glass beads). The obtained nanoMIPs are virtually free of template and demonstrate high affinity for the target molecule (e.g., melamine and trypsin in our published work). Because of an affinity separation step performed on the solid phase after polymerization, poor binders and unproductive polymer are removed, so the final product has more uniform binding characteristics. The overall protocol, starting from the immobilization of the template onto the solid phase and including the purification and characterization of the nanoparticles, takes up to 1 week.


Subject(s)
Molecular Imprinting/methods , Nanoparticles/chemistry , Solid Phase Extraction/methods , Solid-Phase Synthesis Techniques/methods , Binding Sites , Polymers/chemistry , Triazines/chemistry , Triazines/isolation & purification , Trypsin/chemistry , Trypsin/isolation & purification
17.
Chemosphere ; 148: 241-7, 2016 Apr.
Article in English | MEDLINE | ID: mdl-26807945

ABSTRACT

The toxicity of ionic liquids (ILs) was evaluated by using trypsin as biomarker. Experimental results indicated that the trypsin activity was inhibited by ILs and the degree of inhibition highly depended on the chemical structures of ILs. Primary analysis illustrated that hydrophobicity of ILs was one of the driven forces ruling the ILs-trypsin interaction. Thermodynamic parameters, Gibbs free energy change (ΔG), enthalpy change (ΔH) and entropy change (ΔS) were obtained by analyzing the fluorescence behavior of trypsin in the presence of ILs. Both negative ΔH and ΔS suggested hydrogen bonding was the major driven force underlying the IL-trypsin interaction. To assess the toxicity of ILs, it should be considered the combination of the hydrogen bonding ability and hydrophobicity of ILs. A regression based model was established to correlate the relationship of the inhibitory ability, hydrophobicity and hydrogen bonding ability of ILs.


Subject(s)
Environmental Pollutants/toxicity , Ionic Liquids/toxicity , Trypsin/chemistry , Animals , Benzoylarginine Nitroanilide/chemistry , Binding Sites , Cattle , Environmental Pollutants/chemistry , Enzyme Stability , Hydrogen Bonding , Hydrophobic and Hydrophilic Interactions , Ionic Liquids/chemistry , Models, Theoretical , Pancreas/enzymology , Spectrometry, Fluorescence , Substrate Specificity , Thermodynamics , Trypsin/isolation & purification , Trypsin/metabolism
18.
Biosens Bioelectron ; 79: 347-52, 2016 May 15.
Article in English | MEDLINE | ID: mdl-26724537

ABSTRACT

The development of simple and sensitive methods for protease sensing plays important roles in clinical diagnostics and drug development. Here a simple, rapid, label-free, and sensitive trypsin colorimetric sensor was developed by employing cytochrome c (cyt c) as an enzyme substrate and 3,3´,5,5´-tetramethylbenzidine (TMB) as a chromogenic reagent. It was found that cyt c hardly catalyzes H2O2-mediated TMB oxidation to produce a blue solution. But the hydrolysate of cyt c by trypsin displays an intense catalytic effect on the aforementioned reaction, resulting in the formation of a blue solution immediately. The detection process allows visually perceiving as low as 50 ng/mL trypsin with the naked eyes. With the aid of a spectrophotometer, the absorbance at 652 nm was proportional to the concentration of trypsin in the range from 5.0 ng/mL to 2.0 µg/mL with a detection limit of 4.5 ng/mL. The sensor showed better precision with relative standard deviation of 2.5% and 1.7% for eleven repetitive measurements of 50.0 ng/mL and 1.0 µg/mL trypsin solution, respectively. The procedure has been successfully applied to the determination of trypsin in human urines and for inhibitor screening, demonstrating its potential application in clinic diagnosis and drug development.


Subject(s)
Biosensing Techniques/methods , Cytochromes c/chemistry , Trypsin/isolation & purification , Benzidines/chemistry , Catalysis , Colorimetry/methods , Humans , Limit of Detection , Oxidation-Reduction , Trypsin/chemistry
19.
Biosens Bioelectron ; 78: 213-220, 2016 Apr 15.
Article in English | MEDLINE | ID: mdl-26613511

ABSTRACT

We report a new mechanism for liquid crystal (LC)-based sensor system for trypsin detection. In this system, bovine serum albumin (BSA) was immobilized on gold grids as the enzymatic substrate. When the BSA-modified grid was filled with LC and immersed in the solution containing trypsin, the peptide bonds of BSA were hydrolyzed and peptide fragments were desorbed from the surface of gold grid, which disrupted the orientation of LC at the vicinity and resulted in a dark-to-bright transition of optical image of LCs. By using this mechanism, the limit of detection (LOD) of trypsin is 10 ng/mL, and it does not respond to thrombin and pepsin. Besides, the cleavage behavior on gold surfaces was directly visualized by the scanning photoelectron microscopy (SPEM), in particular for the chemical composition identification and element-resolved image. The loss of BSA fragments and the enhancement of Au photoelectron signal after trypsin cleavage were corresponding to the proposed mechanism of the LC-based sensor system. Because the signals reported by LC can be simply interpreted through the human naked-eye, it provides a simple method for fast-screening trypsin activity in aqueous solution.


Subject(s)
Biosensing Techniques , Serum Albumin, Bovine/chemistry , Trypsin/isolation & purification , Animals , Cattle , Humans , Liquid Crystals/chemistry , Solutions/chemistry , Trypsin/chemistry , Water/chemistry
20.
Protein Expr Purif ; 116: 120-6, 2015 Dec.
Article in English | MEDLINE | ID: mdl-26318238

ABSTRACT

Trypsin is one of the most important enzymatic tools in proteomics and biopharmaceutical studies. Here, we describe the complete recombinant expression and purification from a trypsinogen expression vector construct. The Sus scrofa cationic trypsin gene with a propeptide sequence was optimized according to Escherichia coli codon-usage bias and chemically synthesized. The gene was inserted into pET-11c plasmid to yield an expression vector. Using high-density E. coli fed-batch fermentation, trypsinogen was expressed in inclusion bodies at 1.47 g/L. The inclusion body was refolded with a high yield of 36%. The purified trypsinogen was then activated to produce trypsin. To address stability problems, the trypsin thus produced was acetylated. The final product was generated upon gel filtration. The final yield of acetylated trypsin was 182 mg/L from a 5-L fermenter. Our acetylated trypsin product demonstrated higher BAEE activity (30,100 BAEE unit/mg) than a commercial product (9500 BAEE unit/mg, Promega). It also demonstrated resistance to autolysis. This is the first report of production of acetylated recombinant trypsin that is stable and suitable for scale-up.


Subject(s)
Escherichia coli/genetics , Inclusion Bodies/genetics , Sus scrofa/genetics , Trypsin/genetics , Trypsinogen/genetics , Acetylation , Amino Acid Sequence , Animals , Base Sequence , Bioreactors , Cloning, Molecular/methods , Enzyme Stability , Escherichia coli/metabolism , Gene Expression , Genetic Vectors/chemistry , Genetic Vectors/genetics , Inclusion Bodies/metabolism , Molecular Sequence Data , Protein Refolding , Recombinant Proteins/chemistry , Recombinant Proteins/genetics , Recombinant Proteins/isolation & purification , Recombinant Proteins/metabolism , Sus scrofa/metabolism , Swine , Trypsin/chemistry , Trypsin/isolation & purification , Trypsin/metabolism , Trypsinogen/chemistry , Trypsinogen/isolation & purification , Trypsinogen/metabolism
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